Strain |
Pseudomonas aeruginosa PA7
GCF_000017205.1|latest |
Locus Tag |
PSPA7_0236
|
Name |
|
Replicon | chromosome |
Genomic location | 249559 - 252606 (+ strand) |
RefSeq | YP_001345632.1 |
GI | 152988613 |
Entrez | 5355839 |
NCBI Locus Tag | PSPA7_0236 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RND efflux transporter
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -9.33 |
Kyte-Doolittle Hydrophobicity Value | 0.182 |
Molecular Weight (kDa) | 112.1 |
Isoelectric Point (pI) | 5.67 |
Individual Mappings | |
Additional evidence for subcellular localization |
Identified using the Resistance Gene Identifier (RGI)
Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
TriC | TriC is a resistance nodulation cell division (RND) transporter that is a part of TriABC-OpmH, a triclosan-specific efflux protein. [PMID:17720796] | ARO:3003681 | protein homolog model | Strict | 1925.2 | 99.21 | 3.2.5 |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
6VEJ | TRANSPORT PROTEIN | 01/02/20 | TriABC transporter from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 4.5 | ELECTRON MICROSCOPY | 99.2 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 487 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000156 (999 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PSPA7_0236
Search term: RND efflux transporter
|