Pseudomonas aeruginosa RP73, M062_00405

Cytoplasmic Membrane
Outer Membrane
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP


Database Xref Pathway Version Evidence PMID
KEGG prp03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA: IPR038522 Type IV / VI secretion system, DotU superfamily 63 221 2.9E-54
Gene3D G3DSA:3.30.1330.60 IPR036737 OmpA-like domain superfamily 295 449 1.2E-55
TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family IPR017732 Type IV / VI secretion system, DotU 66 275 1.2E-72
MobiDBLite mobidb-lite consensus disorder prediction 1 57 -
Pfam PF09850 Type VI secretion system protein DotU IPR017732 Type IV / VI secretion system, DotU 67 269 7.0E-69
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 339 437 1.4E-14
SUPERFAMILY SSF103088 IPR036737 OmpA-like domain superfamily 328 443 7.98E-29
TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain IPR017733 Type VI secretion system peptidoglycan-associated domain 307 443 3.2E-53
ProSiteProfiles PS51123 OmpA-like domain profile. IPR006665 OmpA-like domain 327 447 47.344
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 339 443 1.83362E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.