Pseudomonas aeruginosa RP73, M062_00445
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa RP73
GCF_000414035.1|latest |
| Locus Tag |
M062_00445
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 105040 - 105885 (+ strand) |
Cross-References
| RefSeq | YP_008130555.1 |
| GI | 514407714 |
| Entrez | 15957832 |
| NCBI Locus Tag | M062_00445 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
virulence protein, SciE type
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -12.54 |
| Kyte-Doolittle Hydrophobicity Value | 0.019 |
| Molecular Weight (kDa) | 30.4 |
| Isoelectric Point (pI) | 4.41 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 4UQZ | PROTEIN TRANSPORT | 06/25/14 | Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes | PSEUDOMONAS AERUGINOSA PAO1 | 1.599 | X-RAY DIFFRACTION | 100.0 |
| 4UQY | PROTEIN TRANSPORT | 06/25/14 | Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes | PSEUDOMONAS AERUGINOSA PAO1; SYNTHETIC CONSTRUCT | 1.6 | X-RAY DIFFRACTION | 100.0 |
| 4UQX | PROTEIN TRANSPORT | 06/25/14 | Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes | PSEUDOMONAS AERUGINOSA PAO1 | 1.2 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 44 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000085 (304 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: M062_00445
Search term: virulence protein, SciE type
|
Human Homologs
References
No references are associated with this feature.