Pseudomonas aeruginosa RP73, M062_00465

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00382	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07724	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	prp03070	Bacterial secretion system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	prp02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	-	-	18	877	0.0
FunFam	G3DSA:3.40.50.300:FF:000010	Chaperone clpB 1, putative	-	-	182	373	2.5E-83
SMART	SM01086	ClpB_D2_small_2	IPR019489	Clp ATPase, C-terminal	804	896	5.4E-11
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	632	775	2.5E-9
CDD	cd00009	AAA	-	-	212	367	4.50221E-15
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	681	699	4.6E-30
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	190	521	6.56E-73
Coils	Coil	Coil	-	-	443	463	-
Gene3D	G3DSA:1.10.1780.10	-	IPR036628	Clp, N-terminal domain superfamily	1	161	5.2E-41
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	375	579	2.6E-54
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	743	757	4.6E-30
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	183	373	8.4E-72
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	804	878	1.8E-12
FunFam	G3DSA:3.40.50.300:FF:000025	ATP-dependent Clp protease subunit	-	-	585	802	1.3E-78
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	229	370	4.8E-10
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	710	728	4.6E-30
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	631	797	2.0E-38
Gene3D	G3DSA:1.10.8.60	-	-	-	804	900	3.1E-7
SUPERFAMILY	SSF81923	Double Clp-N motif	IPR036628	Clp, N-terminal domain superfamily	12	133	1.41E-17
Coils	Coil	Coil	-	-	474	508	-
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	585	802	1.4E-66
Coils	Coil	Coil	-	-	531	558	-
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	373	468	4.5E-28
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	234	367	2.5E-9
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	636	654	4.6E-30
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	581	878	3.95E-63
NCBIfam	TIGR03345	JCVI: type VI secretion system ATPase TssH	IPR017729	AAA+ ATPase ClpV1	13	888	0.0
CDD	cd19499	RecA-like_ClpB_Hsp104-like	-	-	594	802	5.31451E-91

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.