Pseudomonas protegens Pf-5, PFL_1672

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30433
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071978 bacterial-type flagellum-dependent swarming motility
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30433
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30433 CHEMOTAXIS PROTEIN MOTA IPR047055 Motility protein A-like 1 245 2.7E-77
Pfam PF01618 MotA/TolQ/ExbB proton channel family IPR002898 MotA/TolQ/ExbB proton channel 104 219 3.5E-29
Pfam PF20560 Motility protein A N-terminal IPR046786 Motility protein A, N-terminal 6 65 1.4E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.