Pseudomonas protegens Pf-5, PFL_1852
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006807 | nitrogen compound metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF01177
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0036361 | racemase activity, acting on amino acids and derivatives |
Inferred from Sequence Model
Term mapped from: InterPro:PF01177
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pfl00230 | Purine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pfl01120 | Microbial metabolism in diverse environments | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01177 | Asp/Glu/Hydantoin racemase | IPR015942 | Asp/Glu/hydantoin racemase | 3 | 208 | 3.3E-45 |
| Coils | Coil | Coil | - | - | 154 | 174 | - |
| PANTHER | PTHR28047 | PROTEIN DCG1 | - | - | 1 | 233 | 1.4E-58 |
| FunFam | G3DSA:3.40.50.12500:FF:000001 | Putative hydantoin racemase | - | - | 1 | 237 | 1.2E-97 |
| Gene3D | G3DSA:3.40.50.12500 | - | - | - | 1 | 242 | 1.6E-98 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.