Pseudomonas denitrificans ATCC 13867, H681_24475 (aspA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48557
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006099 tricarboxylic acid cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF10415
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016829 lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF10415
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdr01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.10.275.10 - IPR024083 Fumarase/histidase, N-terminal 8 143 3.3E-52
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 322 338 1.9E-28
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 276 303 1.9E-28
SUPERFAMILY SSF48557 L-aspartase-like IPR008948 L-Aspartase-like 7 465 0.0
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 139 157 1.9E-28
Gene3D G3DSA:1.20.200.10 Fumarase/aspartase (Central domain) - - 144 412 1.9E-81
PRINTS PR00145 Argininosuccinate lyase family signature - - 322 338 6.5E-5
PANTHER PTHR42696 ASPARTATE AMMONIA-LYASE - - 6 470 0.0
PRINTS PR00145 Argininosuccinate lyase family signature - - 138 160 6.5E-5
FunFam G3DSA:1.10.275.10:FF:000001 Fumarate hydratase, mitochondrial - - 8 143 3.8E-52
FunFam G3DSA:1.10.40.30:FF:000002 Fumarate hydratase class II - - 413 468 1.8E-18
FunFam G3DSA:1.20.200.10:FF:000001 Fumarate hydratase, mitochondrial - - 144 411 1.0E-112
PRINTS PR00145 Argininosuccinate lyase family signature - - 179 199 6.5E-5
Pfam PF00206 Lyase IPR022761 Fumarate lyase, N-terminal 15 347 4.8E-99
PRINTS PR00149 Fumarate lyase superfamily signature IPR000362 Fumarate lyase family 184 202 1.9E-28
CDD cd01357 Aspartase - - 8 460 0.0
Pfam PF10415 Fumarase C C-terminus IPR018951 Fumarase C, C-terminal 413 465 4.4E-21
Gene3D G3DSA:1.10.40.30 - - - 413 468 1.5E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.