Pseudomonas aeruginosa PAO1, PA0218
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest |
| Locus Tag |
PA0218
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 245948 - 246868 (- strand) |
| Transposon Mutants | 1 transposon mutants in PAO1 |
| Transposon Mutants in orthologs | 4 transposon mutants in orthologs |
Cross-References
| RefSeq | NP_248909.1 |
| GI | 15595415 |
| Affymetrix | PA0218_at |
| DNASU | PaCD00006098 |
| Entrez | 877906 |
| GenBank | AAG03607.1 |
| INSDC | AAG03607.1 |
| NCBI Locus Tag | PA0218 |
| protein_id(GenBank) | gb|AAG03607.1|AE004459_11|gnl|PseudoCAP|PA0218 |
| TIGR | NTL03PA00219 |
| UniParc | UPI00000C4FA1 |
| UniProtKB Acc | Q9I6S0 |
| UniProtKB ID | Q9I6S0_PSEAE |
| UniRef100 | UniRef100_W0YJN1 |
| UniRef50 | UniRef50_Q4K6E1 |
| UniRef90 | UniRef90_B7V2D0 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
probable transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.23 |
| Kyte-Doolittle Hydrophobicity Value | -0.054 |
| Molecular Weight (kDa) | 34.0 |
| Isoelectric Point (pI) | 6.31 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold Protein Structure Database
Available for P. aeruginosa PAO1.
| View predicted 3D structure in AlphaFold DB |
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3FZV | TRANSCRIPTION REGULATOR | 01/26/09 | Crystal structure of PA01 protein, putative LysR family transcriptional regulator from Pseudomonas aeruginosa | Pseudomonas aeruginosa PA01 | 2.71 | X-RAY DIFFRACTION | 100.0 |
| 6M5F | DNA BINDING PROTEIN | 03/10/20 | Crystal structure of HinK, a LysR family transcriptional regulator from Pseudomonas aeruginosa | Pseudomonas aeruginosa PAO1 | 2.75 | X-RAY DIFFRACTION | 99.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 535 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000217 (931 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA0218
Search term: probable transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.