Pseudomonas aeruginosa PAO1, PA0248

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Stover et al., 2000) GCF_000006765.1|latest
Locus Tag	PA0248
Name	Synonym: pobR
Replicon	chromosome
Genomic location	280936 - 281802 (+ strand)
Transposon Mutants	6 transposon mutants in PAO1
Transposon Mutants in orthologs	2 transposon mutants in orthologs

Cross-References

RefSeq	NP_248939.1
GI	15595445
Affymetrix	PA0248_at
DNASU	PaCD00006110
Entrez	881969
GenBank	AAG03637.1
INSDC	AAG03637.1
NCBI Locus Tag	PA0248
protein_id(GenBank)	gb|AAG03637.1|AE004463_2|gnl|PseudoCAP|PA0248
TIGR	NTL03PA00249
UniParc	UPI00000C4FBD
UniProtKB Acc	Q9I6P1
UniProtKB ID	Q9I6P1_PSEAE
UniRef100	UniRef100_W1MUJ3
UniRef50	UniRef50_A6UY44
UniRef90	UniRef90_A6UY44

Product

Feature Type	CDS
Coding Frame	1
Product Name	probable transcriptional regulator Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7)	5.34
Kyte-Doolittle Hydrophobicity Value	-0.185
Molecular Weight (kDa)	32.4
Isoelectric Point (pI)	8.99

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 315 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000246 (890 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA0248 Search term: probable transcriptional regulator

Human Homologs

References