Pseudomonas aeruginosa UCBPP-PA14, PA14_03920 (spuD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_03920
Name
spuD
Replicon chromosome
Genomic location 352562 - 353665 (+ strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_788469.1
GI 116054026
Entrez 4383704
INSDC ABJ15262.1
NCBI Locus Tag PA14_03920
UniParc UPI00000C4FEF
UniProtKB Acc Q02UB7
UniProtKB ID SPUD_PSEAB
UniRef100 UniRef100_Q02UB7
UniRef50 UniRef50_P31133
UniRef90 UniRef90_Q02UB7

Product

Feature Type CDS
Coding Frame 1
Product Name
polyamine transport protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.14
Kyte-Doolittle Hydrophobicity Value -0.292
Molecular Weight (kDa) 40.6
Isoelectric Point (pI) 7.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3TTM TRANSPORT PROTEIN 09/15/11 Crystal structure of SpuD in complex with putrescine Pseudomonas aeruginosa 2 X-RAY DIFFRACTION 99.7
3TTK TRANSPORT PROTEIN 09/14/11 Crystal structure of apo-SpuD Pseudomonas aeruginosa 2.97 X-RAY DIFFRACTION 99.7

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 306 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000297 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_03920
Search term: spuD

Human Homologs

References

No references are associated with this feature.