Pseudomonas aeruginosa UCBPP-PA14, PA14_11110 (cupB6)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_11110
Name
cupB6
Replicon chromosome
Genomic location 964995 - 966140 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 12 transposon mutants in orthologs

Cross-References

RefSeq YP_789039.1
GI 116052117
Entrez 4382070
INSDC ABJ13353.1
NCBI Locus Tag PA14_11110
UniParc UPI0000396285
UniProtKB Acc Q02SP7
UniProtKB ID Q02SP7_PSEAB
UniRef100 UniRef100_Q02SP7
UniRef50 UniRef50_Q9HWU7
UniRef90 UniRef90_Q9HWU7

Product

Feature Type CDS
Coding Frame 1
Product Name
fimbrial protein cupB6
Synonyms
Evidence for Translation
Charge (pH 7) 7.30
Kyte-Doolittle Hydrophobicity Value -0.056
Molecular Weight (kDa) 40.1
Isoelectric Point (pI) 9.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5CYL CELL ADHESION 07/30/15 Crystal structure of the CupB6 tip adhesin from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.77 X-RAY DIFFRACTION 99.1

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000955 (1577 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_11110
Search term: cupB6

Human Homologs

References

No references are associated with this feature.