Pseudomonas aeruginosa UCBPP-PA14, PA14_12080 (sltB1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_12080
Name
sltB1
Replicon chromosome
Genomic location 1043998 - 1045020 (+ strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_789118.1
GI 116052039
Entrez 4383488
INSDC ABJ13275.1
NCBI Locus Tag PA14_12080
UniParc UPI00000C5BB9
UniProtKB Acc Q02SG8
UniProtKB ID Q02SG8_PSEAB
UniRef100 UniRef100_Q9HX24
UniRef50 UniRef50_Q9HX24
UniRef90 UniRef90_Q9HX24

Product

Feature Type CDS
Coding Frame 1
Product Name
soluble lytic transglycosylase B
Synonyms
Evidence for Translation
Charge (pH 7) -3.79
Kyte-Doolittle Hydrophobicity Value -0.239
Molecular Weight (kDa) 37.8
Isoelectric Point (pI) 5.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5O8X LYASE 06/14/17 The X-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.5 X-RAY DIFFRACTION 100.0
4ANR LYASE 03/22/12 Crystal structure of soluble lytic Transglycosylase SltB1 from Pseudomonas aeruginosa PSEUDOMONAS AERUGINOSA 1.84 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 229 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001682 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_12080
Search term: sltB1

Human Homologs

References

No references are associated with this feature.