Pseudomonas aeruginosa UCBPP-PA14, PA14_46810

Gene Feature Overview

Strain	Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006) GCF_000014625.1|latest
Locus Tag	PA14_46810
Name
Replicon	chromosome
Genomic location	4168546 - 4169769 (- strand)
Transposon Mutants	1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs	5 transposon mutants in orthologs

Cross-References

RefSeq	YP_791894.1
GI	116049303
Entrez	4383064
INSDC	ABJ10539.1
NCBI Locus Tag	PA14_46810
UniParc	UPI0000E44B33
UniProtKB Acc	Q02JJ2
UniProtKB ID	Q02JJ2_PSEAB
UniRef100	UniRef100_Q02JJ2
UniRef50	UniRef50_H0TR34
UniRef90	UniRef90_A6V8K1

Product

Feature Type	CDS
Coding Frame	1
Product Name	RNA polymerase ECF-subfamily sigma-70 factor
Synonyms
Evidence for Translation
Charge (pH 7)	-3.67
Kyte-Doolittle Hydrophobicity Value	-0.146
Molecular Weight (kDa)	45.6
Isoelectric Point (pI)	6.05

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 147 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001286 (856 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA14_46810 Search term: RNA polymerase ECF-subfamily sigma-70 factor

Human Homologs

References