Pseudomonas aeruginosa PAO1, PA4068

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA4068
Name
Replicon chromosome
Genomic location 4545746 - 4546675 (- strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_252757.1
GI 15599263
Affymetrix PA4068_at
DNASU PaCD00007778
Entrez 878712
GenBank AAG07455.1
INSDC AAG07455.1
NCBI Locus Tag PA4068
protein_id(GenBank) gb|AAG07455.1|AE004823_1|gnl|PseudoCAP|PA4068
TIGR NTL03PA04068
UniParc UPI00000C5BEE
UniProtKB Acc Q9HWW0
UniProtKB ID Q9HWW0_PSEAE
UniRef100 UniRef100_W0YXN2
UniRef50 UniRef50_K9NPM9
UniRef90 UniRef90_A6V034

Product

Feature Type CDS
Coding Frame 1
Product Name
probable epimerase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -4.62
Kyte-Doolittle Hydrophobicity Value -0.071
Molecular Weight (kDa) 33.3
Isoelectric Point (pI) 5.67

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 647 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001617 (520 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA4068

Human Homologs

Ensembl 110, assembly GRCh38.p14
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 4.3e-30
Percent Identity: 31.4
Ensembl 110, assembly GRCh38.p14
UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
E-value: 4.3e-30
Percent Identity: 31.4

References

No references are associated with this feature.