Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA4179
|
Name |
Synonym: opdN |
Replicon | chromosome |
Genomic location | 4674944 - 4676239 (+ strand) |
Transposon Mutants | 3 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
RefSeq | NP_252868.1 |
GI | 15599374 |
Affymetrix | PA4179_at |
Entrez | 880312 |
GenBank | AAG07566.1 |
INSDC | AAG07566.1 |
NCBI Locus Tag | PA4179 |
protein_id(GenBank) | gb|AAG07566.1|AE004834_6|gnl|PseudoCAP|PA4179 |
TIGR | NTL03PA04179 |
UniParc | UPI00000C5C58 |
UniProtKB Acc | Q9HWK2 |
UniProtKB ID | Q9HWK2_PSEAE |
UniRef100 | UniRef100_X7DV62 |
UniRef50 | UniRef50_Q4KGR5 |
UniRef90 | UniRef90_B7V6C7 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
probable porin
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | 6.11 |
Kyte-Doolittle Hydrophobicity Value | -0.489 |
Molecular Weight (kDa) | 47.8 |
Isoelectric Point (pI) | 9.05 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
4FSO | TRANSPORT PROTEIN | 06/27/12 | Crystal Structure of Pseudomonas aeruginosa OccK10 (OpdN) | Pseudomonas aeruginosa | 2.75 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 19 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000729 (839 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA4179
Search term: probable porin
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|