Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA5472
|
Name |
|
Replicon | chromosome |
Genomic location | 6161067 - 6161867 (- strand) |
Transposon Mutants | 18 transposon mutants in PAO1 |
Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Comment | Structural similarity to 2Q2C (Arg/Lys/His-binding protein ArtJ from Geobacillus stearothermophilus, root-mean-square deviation: 1.4 angstroms). Sequence similarity to 3RYO (10%/44%) (no ligand). Final predicted ligand: basic amino acid (PMID: 31631799) |
RefSeq | NP_254159.1 |
GI | 15600665 |
Affymetrix | PA5472_at |
DNASU | PaCD00008357 |
Entrez | 877633 |
GenBank | AAG08857.1 |
INSDC | AAG08857.1 |
NCBI Locus Tag | PA5472 |
protein_id(GenBank) | gb|AAG08857.1|AE004959_13|gnl|PseudoCAP|PA5472 |
TIGR | NTL03PA05473 |
UniParc | UPI00000C6025 |
UniProtKB Acc | Q9HT98 |
UniProtKB ID | Q9HT98_PSEAE |
UniRef100 | UniRef100_Q9HT98 |
UniRef50 | UniRef50_Q9HT98 |
UniRef90 | UniRef90_Q9HT98 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
putative basic amino acid ABC transporter substrate-binding protein
|
Synonyms | |
Evidence for Translation |
Detected by MALDI-TOF/TOF (PMID:19333994).
|
Charge (pH 7) | -4.89 |
Kyte-Doolittle Hydrophobicity Value | -0.242 |
Molecular Weight (kDa) | 29.1 |
Isoelectric Point (pI) | 5.38 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 9 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG005014 (299 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA5472
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
Analysis of the periplasmic proteome of Pseudomonas aeruginosa, a metabolically versatile opportunistic pathogen.
Imperi F, Ciccosanti F, Perdomo AB, Tiburzi F, Mancone C, Alonzi T, Ascenzi P, Piacentini M, Visca P, Fimia GM
Proteomics 2009 Apr;9(7):1901-15
PubMed ID: 19333994
|
Uncovering the structure and function of Pseudomonas aeruginosa periplasmic proteins by an in silico approach.
Caprari S, Brandi V, Pasquadibisceglie A, Polticelli F
J Biomol Struct Dyn 2020 Sep;38(15):4508-4520
PubMed ID: 31631799
|