Pseudomonas aeruginosa PAO1, PA0117

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Stover et al., 2000) GCF_000006765.1|latest
Locus Tag	PA0117
Name
Replicon	chromosome
Genomic location	137248 - 137976 (+ strand)
Transposon Mutants	2 transposon mutants in PAO1
Transposon Mutants in orthologs	1 transposon mutants in orthologs

Cross-References

RefSeq	NP_248807.1
GI	15595315
Affymetrix	PA0117_at
Entrez	878370
GenBank	AAG03507.1
INSDC	AAG03507.1
NCBI Locus Tag	PA0117
protein_id(GenBank)	gb|AAG03507.1|AE004450_2|gnl|PseudoCAP|PA0117
TIGR	NTL03PA00118
UniParc	UPI00000C4F46
UniProtKB Acc	Q9I715
UniProtKB ID	Q9I715_PSEAE
UniRef100	UniRef100_Q9I715
UniRef50	UniRef50_V4YMR9
UniRef90	UniRef90_Q9I715

Product

Feature Type	CDS
Coding Frame	1
Product Name	probable short chain dehydrogenase Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7)	-0.71
Kyte-Doolittle Hydrophobicity Value	-0.152
Molecular Weight (kDa)	27.0
Isoelectric Point (pI)	6.78

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 606 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000115 (445 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA0117 Search term: probable short chain dehydrogenase

Human Homologs

References