Pseudomonas aeruginosa PAO1, PA0117

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0117
Name
Replicon chromosome
Genomic location 137248 - 137976 (+ strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_248807.1
GI 15595315
Affymetrix PA0117_at
Entrez 878370
GenBank AAG03507.1
INSDC AAG03507.1
NCBI Locus Tag PA0117
protein_id(GenBank) gb|AAG03507.1|AE004450_2|gnl|PseudoCAP|PA0117
TIGR NTL03PA00118
UniParc UPI00000C4F46
UniProtKB Acc Q9I715
UniProtKB ID Q9I715_PSEAE
UniRef100 UniRef100_Q9I715
UniRef50 UniRef50_V4YMR9
UniRef90 UniRef90_Q9I715

Product

Feature Type CDS
Coding Frame 1
Product Name
probable short chain dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Charge (pH 7) -0.71
Kyte-Doolittle Hydrophobicity Value -0.152
Molecular Weight (kDa) 27.0
Isoelectric Point (pI) 6.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold Protein Structure Database

Available for P. aeruginosa PAO1.

View predicted 3D structure in AlphaFold DB

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 606 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000115 (458 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0117

Human Homologs

References

No references are associated with this feature.