Strain |
Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest |
Locus Tag |
PA0607
|
Name |
rpe
Synonym: dod |
Replicon | chromosome |
Genomic location | 669415 - 670089 (+ strand) |
RefSeq | NP_249298.1 |
GI | 15595804 |
Affymetrix | PA0607_rpe_at |
Entrez | 878162 |
GenBank | AAG03996.1 |
INSDC | AAG03996.1 |
NCBI Locus Tag | PA0607 |
protein_id(GenBank) | gb|AAG03996.1|AE004497_3|gnl|PseudoCAP|PA0607 |
TIGR | NTL03PA00608 |
UniParc | UPI00000C50D7 |
UniProtKB Acc | Q9I5T1 |
UniProtKB ID | Q9I5T1_PSEAE |
UniRef100 | UniRef100_W0YMA3 |
UniRef50 | UniRef50_P40117 |
UniRef90 | UniRef90_Q88A31 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
ribulose-phosphate 3-epimerase
|
Synonyms | |
Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
Charge (pH 7) | -7.38 |
Kyte-Doolittle Hydrophobicity Value | 0.208 |
Molecular Weight (kDa) | 24.1 |
Isoelectric Point (pI) | 5.05 |
Individual Mappings | |
Additional evidence for subcellular localization |
Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
7U5Y | ISOMERASE | 03/02/22 | Crystal structure of ribulose-phosphate 3-epimerase from Pseudomonas aeruginosa | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 2.55 | X-RAY DIFFRACTION | 100.0 |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 594 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000590 (536 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PA0607
Search term: rpe
Search term: ribulose-phosphate 3-epimerase
|
Ensembl
110, assembly
GRCh38.p14
|
ribulose-5-phosphate-3-epimerase [Source:HGNC Symbol;Acc:HGNC:10293]
E-value:
4.1e-38
Percent Identity:
39.1
|
Characterization of three genes in the dam-containing operon of Escherichia coli.
Lyngstadaas A, Løbner-Olesen A, Boye E
Mol Gen Genet 1995 Jun 10;247(5):546-54
PubMed ID: 7603433
|
Involvement of the ribulosephosphate epimerase gene in the dnaA and dnaR functions for initiation of chromosome replication in Escherichia coli.
Sakakibara Y
Mol Microbiol 1997 May;24(4):793-801
PubMed ID: 9194706
|
Impaired growth of an Escherichia coli rpe mutant lacking ribulose-5-phosphate epimerase activity.
Lyngstadaas A, Sprenger GA, Boye E
Biochim Biophys Acta 1998 Aug 24;1381(3):319-30
PubMed ID: 9729441
|