Pseudomonas aeruginosa PAO1, PA1081 (flgF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1081
Name
flgF
Replicon chromosome
Genomic location 1167488 - 1168237 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_249772.1
GI 15596278
Affymetrix PA1081_flgF_at
DNASU PaCD00006498
Entrez 878576
GenBank AAG04470.1
INSDC AAG04470.1
NCBI Locus Tag PA1081
protein_id(GenBank) gb|AAG04470.1|AE004539_12|gnl|PseudoCAP|PA1081
TIGR NTL03PA01082
UniParc UPI00000C523E
UniProtKB Acc Q9I4P8
UniProtKB ID Q9I4P8_PSEAE
UniRef100 UniRef100_W0YKY5
UniRef50 UniRef50_A6V9B4
UniRef90 UniRef90_A6V9B4

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar basal-body rod protein FlgF
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) -9.79
Kyte-Doolittle Hydrophobicity Value -0.184
Molecular Weight (kDa) 26.7
Isoelectric Point (pI) 4.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

Virulence Evidence

Source 1
Database VFDB : VF0273
Category Flagella
Evidence
Host Organism
Notes
Reference 14617143

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 309 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001043 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1081
Search term: flgF

References

FlgB, FlgC, FlgF and FlgG. A family of structurally related proteins in the flagellar basal body of Salmonella typhimurium.
Homma M, Kutsukake K, Hasebe M, Iino T, Macnab RM
J Mol Biol 1990 Jan 20;211(2):465-77
PubMed ID: 2129540
Stoichiometric analysis of the flagellar hook-(basal-body) complex of Salmonella typhimurium.
Jones CJ, Macnab RM, Okino H, Aizawa S
J Mol Biol 1990 Mar 20;212(2):377-87
PubMed ID: 2181149