Pseudomonas aeruginosa PAO1, PA2486 (ptrC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA2486
Name
ptrC
Replicon chromosome
Genomic location 2803640 - 2803834 (+ strand)
Transposon Mutants in orthologs 1 transposon mutants in orthologs
Comment

Cross-References

RefSeq NP_251176.1
GI 15597682
Affymetrix PA2486_at
Entrez 880512
GenBank AAG05874.1
INSDC AAG05874.1
NCBI Locus Tag PA2486
protein_id(GenBank) gb|AAG05874.1|AE004676_6|gnl|PseudoCAP|PA2486
TIGR NTL03PA02486
UniParc UPI00000C56FC
UniProtKB Acc Q9I0Z6
UniProtKB ID Q9I0Z6_PSEAE
UniRef100 UniRef100_W0YUI1
UniRef50 UniRef50_W0YUI1
UniRef90 UniRef90_W0YUI1

Product

Feature Type CDS
Coding Frame 1
Product Name
Pseudomonas type III repressor gene C, PtrC
Product Name Confidence: Class 1
Synonyms hypothetical protein
Evidence for Translation
Charge (pH 7) -2.60
Kyte-Doolittle Hydrophobicity Value -0.430
Molecular Weight (kDa) 7.4
Isoelectric Point (pI) 5.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003068 (299 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2486
Search term: ptrC

Human Homologs

References

MexT regulates the type III secretion system through MexS and PtrC in Pseudomonas aeruginosa.
Jin Y, Yang H, Qiao M, Jin S
J. Bacteriol. 2011 Jan;193(2):399-410
PubMed ID: 21075931