Pseudomonas aeruginosa PAO1, PA3555 (arnD)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest |
| Locus Tag |
PA3555
|
| Name |
arnD
Synonym: arnD Synonym: amrJ |
| Replicon | chromosome |
| Genomic location | 3984006 - 3984893 (+ strand) |
| Transposon Mutants | 2 transposon mutants in PAO1 |
Cross-References
| RefSeq | NP_252245.1 |
| GI | 15598751 |
| Affymetrix | PA3555_at |
| Entrez | 879121 |
| GenBank | AAG06943.1 |
| INSDC | AAG06943.1 |
| NCBI Locus Tag | PA3555 |
| protein_id(GenBank) | gb|AAG06943.1|AE004776_6|gnl|PseudoCAP|PA3555 |
| TIGR | NTL03PA03555 |
| UniParc | UPI00000C5A66 |
| UniProtKB Acc | Q9HY62 |
| UniProtKB ID | ARND_PSEAE |
| UniRef100 | UniRef100_B7VBN1 |
| UniRef50 | UniRef50_O52326 |
| UniRef90 | UniRef90_B7VBN1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ArnD
|
| Synonyms |
ArnD |
| Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
| Charge (pH 7) | 9.60 |
| Kyte-Doolittle Hydrophobicity Value | -0.285 |
| Molecular Weight (kDa) | 32.9 |
| Isoelectric Point (pI) | 10.39 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold Protein Structure Database
Available for P. aeruginosa PAO1.
| View predicted 3D structure in AlphaFold DB |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 49 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002111 (427 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA3555
Search term: arnD
Search term: ArnD
|
Human Homologs
References
|
PmrA-PmrB-regulated genes necessary for 4-aminoarabinose lipid A modification and polymyxin resistance.
Gunn JS, Lim KB, Krueger J, Kim K, Guo L, Hackett M, Miller SI
Mol. Microbiol. 1998 Mar;27(6):1171-82
PubMed ID: 9570402
|