Pseudomonas aeruginosa PAO1, PA3558 (arnF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest |
| Locus Tag |
PA3558
|
| Name |
arnF
Synonym: arnF Synonym: pmrM |
| Replicon | chromosome |
| Genomic location | 3986880 - 3987293 (+ strand) |
| Transposon Mutants | 1 transposon mutants in PAO1 |
Cross-References
| RefSeq | NP_252248.1 |
| GI | 15598754 |
| Affymetrix | PA3558_at |
| DNASU | PaCD00007560 |
| Entrez | 879133 |
| GenBank | AAG06946.1 |
| INSDC | AAG06946.1 |
| NCBI Locus Tag | PA3558 |
| protein_id(GenBank) | gb|AAG06946.1|AE004776_9|gnl|PseudoCAP|PA3558 |
| TIGR | NTL03PA03558 |
| UniParc | UPI000013C2D0 |
| UniProtKB Acc | Q9HY59 |
| UniProtKB ID | ARNF_PSEAE |
| UniRef100 | UniRef100_Q9HY59 |
| UniRef50 | UniRef50_Q9HY59 |
| UniRef90 | UniRef90_Q9HY59 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ArnF
|
| Synonyms |
ArnF |
| Evidence for Translation | |
| Charge (pH 7) | 7.67 |
| Kyte-Doolittle Hydrophobicity Value | 0.627 |
| Molecular Weight (kDa) | 14.3 |
| Isoelectric Point (pI) | 10.98 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold Protein Structure Database
Available for P. aeruginosa PAO1.
| View predicted 3D structure in AlphaFold DB |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 36 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002108 (420 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA3558
Search term: arnF
Search term: ArnF
|
Human Homologs
References
|
Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295
|
|
PmrA-PmrB-regulated genes necessary for 4-aminoarabinose lipid A modification and polymyxin resistance.
Gunn JS, Lim KB, Krueger J, Kim K, Guo L, Hackett M, Miller SI
Mol. Microbiol. 1998 Mar;27(6):1171-82
PubMed ID: 9570402
|
|
An undecaprenyl phosphate-aminoarabinose flippase required for polymyxin resistance in Escherichia coli.
Yan A, Guan Z, Raetz CR
J. Biol. Chem. 2007 Dec;282(49):36077-89
PubMed ID: 17928292
|