Pseudomonas aeruginosa PAO1, PA0006

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Reference) GCF_000006765.1|latest
Locus Tag	PA0006
Name	Synonym: yaeD
Replicon	chromosome
Genomic location	7803 - 8339 (- strand)
Transposon Mutants	1 transposon mutants in PAO1
Transposon Mutants in orthologs	1 transposon mutants in orthologs

Cross-References

RefSeq	NP_064726.1
GI	15595204
Affymetrix	PA0006_at
DNASU	PaCD00006006
Entrez	879245
GenBank	AAG03396.1
INSDC	AAG03396.1
NCBI Locus Tag	PA0006
protein_id(GenBank)	gb|AAG03396.1|AE004440_6|gnl|PseudoCAP|PA0006
TIGR	NTL03PA00007
UniParc	UPI00000C4EE3
UniProtKB Acc	Q9I7C0
UniProtKB ID	GMHBB_PSEAE
UniRef100	UniRef100_Q9I7C0
UniRef50	UniRef50_Q9I7C0
UniRef90	UniRef90_Q9I7C0

Product

Feature Type	CDS
Coding Frame	1
Product Name	conserved hypothetical protein Product Name Confidence: Class 4
Synonyms
Evidence for Translation	Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7)	-8.41
Kyte-Doolittle Hydrophobicity Value	0.068
Molecular Weight (kDa)	19.1
Isoelectric Point (pI)	4.49

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold Protein Structure Database

Available for P. aeruginosa PAO1.

View predicted 3D structure in AlphaFold DB

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 360 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000006 (555 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA0006

Human Homologs

References