Pseudomonas aeruginosa PAO1, PA0006

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0006
Name
Synonym: yaeD
Replicon chromosome
Genomic location 7803 - 8339 (- strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_064726.1
GI 15595204
Affymetrix PA0006_at
DNASU PaCD00006006
Entrez 879245
GenBank AAG03396.1
INSDC AAG03396.1
NCBI Locus Tag PA0006
protein_id(GenBank) gb|AAG03396.1|AE004440_6|gnl|PseudoCAP|PA0006
TIGR NTL03PA00007
UniParc UPI00000C4EE3
UniProtKB Acc Q9I7C0
UniProtKB ID GMHBB_PSEAE
UniRef100 UniRef100_Q9I7C0
UniRef50 UniRef50_Q9I7C0
UniRef90 UniRef90_Q9I7C0

Product

Feature Type CDS
Coding Frame 1
Product Name
conserved hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) -8.41
Kyte-Doolittle Hydrophobicity Value 0.068
Molecular Weight (kDa) 19.1
Isoelectric Point (pI) 4.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold Protein Structure Database

Available for P. aeruginosa PAO1.

View predicted 3D structure in AlphaFold DB

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 360 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000006 (555 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0006

Human Homologs

References

No references are associated with this feature.