Pseudomonas aeruginosa PAO1, PA0003 (recF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest |
| Locus Tag |
PA0003
|
| Name |
recF
|
| Replicon | chromosome |
| Genomic location | 3169 - 4278 (+ strand) |
| Transposon Mutants | 3 transposon mutants in PAO1 |
| Transposon Mutants in orthologs | 1 transposon mutants in orthologs |
Cross-References
| RefSeq | NP_064723.1 |
| GI | 15595201 |
| Affymetrix | PA0003_recF_at |
| DNASU | PaCD00006005 |
| Entrez | 879229 |
| GenBank | AAG03393.1 |
| INSDC | AAG03393.1 |
| NCBI Locus Tag | PA0003 |
| protein_id(GenBank) | gb|AAG03393.1|AE004440_3|gnl|PseudoCAP|PA0003 |
| TIGR | NTL03PA00004 |
| UniParc | UPI0000133565 |
| UniProtKB Acc | Q9I7C3 |
| UniProtKB ID | RECF_PSEAE |
| UniRef100 | UniRef100_Q02V78 |
| UniRef50 | UniRef50_P13456 |
| UniRef90 | UniRef90_Q02V78 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
RecF protein
|
| Synonyms | |
| Evidence for Translation |
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
|
| Charge (pH 7) | 4.23 |
| Kyte-Doolittle Hydrophobicity Value | -0.249 |
| Molecular Weight (kDa) | 41.5 |
| Isoelectric Point (pI) | 8.15 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold Protein Structure Database
Available for P. aeruginosa PAO1.
| View predicted 3D structure in AlphaFold DB |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 464 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000003 (553 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA0003
Search term: recF
Search term: RecF protein
|
Human Homologs
References
|
Structure of the dnaA region of Pseudomonas putida: conservation among three bacteria, Bacillus subtilis, Escherichia coli and P. putida.
Fujita MQ, Yoshikawa H, Ogasawara N
Mol Gen Genet 1989 Feb;215(3):381-7
PubMed ID: 2540413
|
|
Sequence and complementation analysis of recF genes from Escherichia coli, Salmonella typhimurium, Pseudomonas putida and Bacillus subtilis: evidence for an essential phosphate binding loop.
Sandler SJ, Chackerian B, Li JT, Clark AJ
Nucleic Acids Res 1992 Feb 25;20(4):839-45
PubMed ID: 1542576
|