Pseudomonas fluorescens F113, PSF113_4067

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4067
Name
Replicon chromosome
Genomic location 4794692 - 4795438 (+ strand)

Cross-References

RefSeq YP_005209459.1
GI 378951971
EC Number 1.1.1.100
Entrez 11832163
NCBI Locus Tag PSF113_4067

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase/reductase family oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) -4.77
Kyte-Doolittle Hydrophobicity Value 0.231
Molecular Weight (kDa) 25030.0
Isoelectric Point (pI) 4.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000180 (2706 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4067

Human Homologs

Ensembl 97, assembly GRCh38.p12
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 2.9e-25
Percent Identity: 35.1
Ensembl 97, assembly GRCh38.p12
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 2.9e-25
Percent Identity: 35.1

References

No references are associated with this feature.