Pseudomonas fluorescens F113, PSF113_5800 (impD2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5800
Name
impD2
Replicon chromosome
Genomic location 6684399 - 6684887 (+ strand)

Cross-References

RefSeq YP_005211169.1
GI 378953681
Entrez 11833922
INSDC AEV65774.1
NCBI Locus Tag PSF113_5800
UniParc UPI0002040BDD
UniProtKB Acc G8Q718
UniProtKB ID G8Q718_PSEFL
UniRef100 UniRef100_A0A0D0S5Z3
UniRef50 UniRef50_Q4K3N6
UniRef90 UniRef90_Q4K3N6

Product

Feature Type CDS
Coding Frame 1
Product Name
protein ImpD
Synonyms
Evidence for Translation
Charge (pH 7) -0.08
Kyte-Doolittle Hydrophobicity Value -0.326
Molecular Weight (kDa) 17.5
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 80 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000084 (770 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5800
Search term: impD2
Search term: protein ImpD

Human Homologs

References

No references are associated with this feature.