Pseudomonas fluorescens A506, PflA506_3948

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens A506
GCF_000262325.2|latest
Locus Tag
PflA506_3948
Name
Replicon chromosome
Genomic location 4380877 - 4381623 (+ strand)

Cross-References

RefSeq YP_006325384.1
GI 387895087
Entrez 12959059
INSDC AFJ54656.1
NCBI Locus Tag PflA506_3948
UniParc UPI00025E896D
UniProtKB Acc I2BK73
UniProtKB ID I2BK73_PSEFL
UniRef100 UniRef100_I2BK73
UniRef50 UniRef50_K4R714
UniRef90 UniRef90_W2D7K7

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase/reductase family oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) -5.04
Kyte-Doolittle Hydrophobicity Value 0.236
Molecular Weight (kDa) 25.2
Isoelectric Point (pI) 5.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000180 (2706 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PflA506_3948

Human Homologs

Ensembl 97, assembly GRCh38.p12
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 3.9e-22
Percent Identity: 34.0
Ensembl 97, assembly GRCh38.p12
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 3.9e-22
Percent Identity: 34.0

References

No references are associated with this feature.