Pseudomonas putida F1, Pput_0004 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida F1
GCF_000016865.1|latest |
| Locus Tag |
Pput_0004
|
| Name |
gyrB
|
| Replicon | chromosome |
| Genomic location | 4170 - 6590 (+ strand) |
Cross-References
| RefSeq | YP_001265365.1 |
| GI | 148545263 |
| Entrez | 5192243 |
| INSDC | ABQ76181.1 |
| NCBI Locus Tag | Pput_0004 |
| UniParc | UPI000000E982 |
| UniProtKB Acc | A5VWC1 |
| UniProtKB ID | A5VWC1_PSEP1 |
| UniRef100 | UniRef100_I7BRI4 |
| UniRef50 | UniRef50_P13364 |
| UniRef90 | UniRef90_P13364 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DNA gyrase subunit B
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -14.24 |
| Kyte-Doolittle Hydrophobicity Value | -0.384 |
| Molecular Weight (kDa) | 90.0 |
| Isoelectric Point (pI) | 5.76 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 633 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000004 (553 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pput_0004
Search term: gyrB
Search term: DNA gyrase subunit B
|
Human Homologs
|
Ensembl
107, assembly
GRCh38.p13
|
DNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]
E-value:
2.2e-33
Percent Identity:
26.1
|
References
No references are associated with this feature.