Pseudomonas putida F1, Pput_0006
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida F1
GCF_000016865.1|latest |
| Locus Tag |
Pput_0006
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 8046 - 10004 (+ strand) |
Cross-References
| RefSeq | YP_001265367.1 |
| GI | 148545265 |
| Entrez | 5193320 |
| INSDC | ABQ76183.1 |
| NCBI Locus Tag | Pput_0006 |
| UniParc | UPI00005FDD35 |
| UniProtKB Acc | A5VWC3 |
| UniProtKB ID | A5VWC3_PSEP1 |
| UniRef100 | UniRef100_A0A088NSG4 |
| UniRef50 | UniRef50_V9QM92 |
| UniRef90 | UniRef90_V9QM92 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
integrase catalytic subunit
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 24.19 |
| Kyte-Doolittle Hydrophobicity Value | -0.458 |
| Molecular Weight (kDa) | 74.4 |
| Isoelectric Point (pI) | 9.89 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 141 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG015019 (77 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pput_0006
Search term: integrase catalytic subunit
|
Human Homologs
References
No references are associated with this feature.