Pseudomonas putida GB-1, PputGB1_0192

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_0192
Name
Replicon chromosome
Genomic location 231845 - 232333 (+ strand)

Cross-References

RefSeq YP_001666443.1
GI 167031212
Entrez 5867889
INSDC ABY96107.1
NCBI Locus Tag PputGB1_0192
UniParc UPI0000F25252
UniProtKB Acc B0KGY8
UniProtKB ID B0KGY8_PSEPG
UniRef100 UniRef100_B0KGY8
UniRef50 UniRef50_Q48KG2
UniRef90 UniRef90_B0KGY8

Product

Feature Type CDS
Coding Frame 1
Product Name
Hcp1 family type VI secretion system effector
Synonyms
Evidence for Translation
Charge (pH 7) -0.63
Kyte-Doolittle Hydrophobicity Value -0.197
Molecular Weight (kDa) 17475.4
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 72 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000084 (770 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_0192

References

No references are associated with this feature.