Pseudomonas putida S16, PPS_1343

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1343
Name
Replicon chromosome
Genomic location 1472304 - 1472645 (+ strand)

Cross-References

RefSeq YP_004700798.1
GI 339486270
Entrez 10937001
INSDC AEJ11918.1
NCBI Locus Tag PPS_1343
UniParc UPI00021735D5
UniProtKB Acc F8G2L7
UniProtKB ID F8G2L7_PSEP6
UniRef100 UniRef100_A0A059UT86
UniRef50 UniRef50_Q88M82
UniRef90 UniRef90_Q88M82

Product

Feature Type CDS
Coding Frame 1
Product Name
Sel1 domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 9.85
Kyte-Doolittle Hydrophobicity Value -0.725
Molecular Weight (kDa) 13015.8
Isoelectric Point (pI) 11.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG015424 (195 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1343

Human Homologs

References

No references are associated with this feature.