Pseudomonas putida BIRD-1, PPUBIRD1_0409

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_0409
Name
Replicon chromosome
Genomic location 476335 - 477615 (+ strand)

Cross-References

RefSeq YP_005928309.1
GI 386010032
EC Number 2.6.1.11
Entrez 12518636
NCBI Locus Tag PPUBIRD1_0409

Product

Feature Type CDS
Coding Frame 1
Product Name
Aminotransferase class-III
Synonyms
Evidence for Translation
Charge (pH 7) 1.04
Kyte-Doolittle Hydrophobicity Value 0.030
Molecular Weight (kDa) 45104.3
Isoelectric Point (pI) 7.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000514 (456 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_0409

Human Homologs

Ensembl 97, assembly GRCh38.p12
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 1.0e-46
Percent Identity: 36.7

References

No references are associated with this feature.