Pseudomonas syringae pv. syringae B728a, Psyr_1882

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_1882
Name
Replicon chromosome
Genomic location 2153993 - 2154496 (- strand)

Cross-References

RefSeq YP_234967.1
GI 66045126
Entrez 3367391
INSDC AAY36929.1
NCBI Locus Tag Psyr_1882
UniParc UPI0000394D8E
UniProtKB Acc Q4ZV93
UniProtKB ID Q4ZV93_PSEU2
UniRef100 UniRef100_Q4ZV93
UniRef50 UniRef50_G0A8C3
UniRef90 UniRef90_Q884L6

Product

Feature Type CDS
Coding Frame 1
Product Name
auxin-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.86
Kyte-Doolittle Hydrophobicity Value -0.424
Molecular Weight (kDa) 18.5
Isoelectric Point (pI) 5.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 121 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017747 (57 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1882

Human Homologs

References

No references are associated with this feature.