Pseudomonas syringae pv. syringae B728a, Psyr_1889

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_1889
Name
Replicon chromosome
Genomic location 2158941 - 2159597 (- strand)

Cross-References

RefSeq YP_234971.1
GI 66045130
Entrez 3367398
INSDC AAY36933.1
NCBI Locus Tag Psyr_1889
UniParc UPI000050D7FD
UniProtKB Acc Q4ZV89
UniProtKB ID Q4ZV89_PSEU2
UniRef100 UniRef100_Q4ZV89
UniRef50 UniRef50_Q88A09
UniRef90 UniRef90_Q88A09

Product

Feature Type CDS
Coding Frame 1
Product Name
type III effector HopH1
Synonyms
Evidence for Translation
Charge (pH 7) 5.65
Kyte-Doolittle Hydrophobicity Value -0.833
Molecular Weight (kDa) 24442.2
Isoelectric Point (pI) 9.46

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in 4 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017310 (2 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1889

Human Homologs

References

No references are associated with this feature.