Pseudomonas syringae pv. syringae B728a, Psyr_1896

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a - Assembly GCF_000012245.1
GCF_000012245.1|latest
Locus Tag
Psyr_1896
Name
Replicon chromosome
Genomic location 2166974 - 2170426 (- strand)

Cross-References

RefSeq YP_234978.1
GI 66045137
Entrez 3367406
INSDC AAY36940.1
NCBI Locus Tag Psyr_1896
UniParc UPI000050D800
UniProtKB Acc Q4ZV82
UniProtKB ID Q4ZV82_PSEU2
UniRef100 UniRef100_Q4ZV82
UniRef50 UniRef50_Q4KFB0
UniRef90 UniRef90_Q4KFB0

Product

Feature Type CDS
Coding Frame 1
Product Name
transcription-repair coupling factor
Synonyms
Evidence for Translation
Charge (pH 7) -15.21
Kyte-Doolittle Hydrophobicity Value -0.211
Molecular Weight (kDa) 129.0
Isoelectric Point (pI) 5.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 630 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002580 (548 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1896

Human Homologs

References

No references are associated with this feature.