Pseudomonas aeruginosa UCBPP-PA14, PA14_00900 (tagF1)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa UCBPP-PA14 - Assembly GCF_000014625.1
GCF_000014625.1|latest |
| Locus Tag |
PA14_00900
|
| Name |
tagF1
|
| Replicon | chromosome |
| Genomic location | 88489 - 89169 (- strand) |
| Transposon Mutants in orthologs | 2 transposon mutants in orthologs |
| Comment | Hcp Secretion Island-I-encoded type VI secretion system (H1-T6SS) |
Cross-References
| RefSeq | YP_788232.1 |
| GI | 116053796 |
| Entrez | 4380422 |
| INSDC | ABJ15032.1 |
| NCBI Locus Tag | PA14_00900 |
| UniParc | UPI000045D380 |
| UniProtKB Acc | Q02V04 |
| UniProtKB ID | Q02V04_PSEAB |
| UniRef100 | UniRef100_Q02V04 |
| UniRef50 | UniRef50_Q4K3P5 |
| UniRef90 | UniRef90_Q9I756 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
TagF1
|
| Synonyms |
hypothetical protein |
| Evidence for Translation | |
| Charge (pH 7) | -8.61 |
| Kyte-Doolittle Hydrophobicity Value | 0.149 |
| Molecular Weight (kDa) | 23.8 |
| Isoelectric Point (pI) | 4.40 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6IZ8 | SIGNALING PROTEIN | 12/18/18 | Crystal Structure of TagF from Pseudomonas aeruginosa | Pseudomonas aeruginosa | 2.7 | X-RAY DIFFRACTION | 99.1 |
| 2QNU | STRUCTURAL GENOMICS, UNKNOWN FUNCTION | 07/19/07 | Crystal structure of PA0076 from Pseudomonas aeruginosa PAO1 at 2.05 A resolution | Pseudomonas aeruginosa PAO1 | 2.05 | X-RAY DIFFRACTION | 99.6 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 49 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000075 (390 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PA14_00900
Search term: tagF1
Search term: TagF1
|
Human Homologs
References
|
RsmA and AmrZ orchestrate the assembly of all three type VI secretion systems in Pseudomonas aeruginosa.
Allsopp LP, Wood TE, Howard SA, Maggiorelli F, Nolan LM, Wettstadt S, Filloux A.
Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7707-7712.
PubMed ID: 28673999
|