Pseudomonas mendocina ymp, Pmen_0002
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina ymp
GCF_000016565.1|latest |
| Locus Tag |
Pmen_0002
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1601 - 2704 (+ strand) |
Cross-References
| RefSeq | YP_001185509.1 |
| GI | 146305044 |
| EC Number | 2.7.7.7 |
| Entrez | 5106313 |
| INSDC | ABP82777.1 |
| NCBI Locus Tag | Pmen_0002 |
| UniParc | UPI0000E786FD |
| UniProtKB Acc | A4XN61 |
| UniProtKB ID | A4XN61_PSEMY |
| UniRef100 | UniRef100_A4XN61 |
| UniRef50 | UniRef50_P0A990 |
| UniRef90 | UniRef90_W6QRJ8 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DNA polymerase III subunit beta
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -10.84 |
| Kyte-Doolittle Hydrophobicity Value | -0.058 |
| Molecular Weight (kDa) | 40.4 |
| Isoelectric Point (pI) | 4.82 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 588 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000002 (555 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pmen_0002
Search term: DNA polymerase III subunit beta
|
Human Homologs
References
No references are associated with this feature.