Pseudomonas mendocina NK-01, MDS_2136

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2136
Name
Replicon chromosome
Genomic location 2348535 - 2349284 (+ strand)

Cross-References

RefSeq YP_004379919.1
GI 330503050
Entrez 10456918
INSDC AEB58167.1
NCBI Locus Tag MDS_2136
UniParc UPI000206DE58
UniProtKB Acc F4DQJ4
UniProtKB ID F4DQJ4_PSEMN
UniRef100 UniRef100_F4DQJ4
UniRef50 UniRef50_K4R714
UniRef90 UniRef90_F4DQJ4

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase/reductase family oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) -5.76
Kyte-Doolittle Hydrophobicity Value 0.078
Molecular Weight (kDa) 25783.8
Isoelectric Point (pI) 4.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000180 (2706 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2136

Human Homologs

Ensembl 97, assembly GRCh38.p12
carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891]
E-value: 3.9e-22
Percent Identity: 33.7

References

No references are associated with this feature.