Pseudomonas mendocina NK-01, MDS_4385

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_4385
Name
Replicon	chromosome
Genomic location	4805570 - 4806712 (- strand)

Cross-References

RefSeq	YP_004382168.1
GI	330505299
Entrez	10459167
INSDC	AEB60416.1
NCBI Locus Tag	MDS_4385
UniParc	UPI000206E1A6
UniProtKB Acc	F4DMB6
UniProtKB ID	F4DMB6_PSEMN
UniRef100	UniRef100_F4DMB6
UniRef50	UniRef50_R8AN22
UniRef90	UniRef90_F4DMB6

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative class III pyridoxal phosphate-dependent aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-1.16
Kyte-Doolittle Hydrophobicity Value	0.234
Molecular Weight (kDa)	39941.7
Isoelectric Point (pI)	6.77

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 637 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000514 (443 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_4385 Search term: putative class III pyridoxal phosphate-dependent aminotransferase

Human Homologs

References