Pseudomonas syringae pv. tomato DC3000, PSPTO_0307

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0307
NCBI Old Locus Tag	PSPTO0307
Name	Synonym: PSPTO0307
Replicon	chromosome
Genomic location	335032 - 335214 (+ strand)

Cross-References

RefSeq	NP_790157.1
GI	28867538
Entrez	1181916
INSDC	AAO53852.1
NCBI Locus Tag	PSPTO_0307
NCBI Old Locus Tag	PSPTO0307
UniParc	UPI00000083B0
UniProtKB Acc	Q88AS9
UniProtKB ID	Q88AS9_PSESM
UniRef100	UniRef100_A0A038G6A1
UniRef50	UniRef50_A0A077LE05
UniRef90	UniRef90_Q500L3

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.22
Kyte-Doolittle Hydrophobicity Value	-0.418
Molecular Weight (kDa)	6.7
Isoelectric Point (pI)	9.44

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 10 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000281 (521 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0307

Human Homologs

References