Pseudomonas sp. UW4, PputUW4_04972

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas sp. UW4
GCF_000316175.1|latest
Locus Tag
PputUW4_04972
Name
Replicon chromosome
Genomic location 5674852 - 5676135 (- strand)

Cross-References

RefSeq YP_007031967.1
GI 426411868
EC Number 2.6.1.11
Entrez 14053115
NCBI Locus Tag PputUW4_04972

Product

Feature Type CDS
Coding Frame 1
Product Name
aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -0.90
Kyte-Doolittle Hydrophobicity Value -0.044
Molecular Weight (kDa) 45412.2
Isoelectric Point (pI) 6.87

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000514 (456 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputUW4_04972
Search term: aminotransferase

Human Homologs

Ensembl 97, assembly GRCh38.p12
5-phosphohydroxy-L-lysine phospho-lyase [Source:HGNC Symbol;Acc:HGNC:28249]
E-value: 7.5e-21
Percent Identity: 27.8

References

No references are associated with this feature.