Pseudomonas protegens Pf-5, PFL_1857

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_1857
Name
Replicon chromosome
Genomic location 2062076 - 2063062 (- strand)

Cross-References

RefSeq YP_258976.1
GI 70729240
Entrez 3479033
INSDC AAY91145.1
NCBI Locus Tag PFL_1857
UniParc UPI000054D276
UniProtKB Acc Q4KFK7
UniProtKB ID Q4KFK7_PSEF5
UniRef100 UniRef100_Q4KFK7
UniRef50 UniRef50_Q0VM84
UniRef90 UniRef90_Q4KFK7

Product

Feature Type CDS
Coding Frame 1
Product Name
alpha-L-glutamate ligase
Synonyms
Evidence for Translation
Charge (pH 7) -2.68
Kyte-Doolittle Hydrophobicity Value -0.095
Molecular Weight (kDa) 36279.5
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 46 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003629 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_1857

Human Homologs

References

No references are associated with this feature.