Strain |
Pseudomonas protegens Pf-5
GCF_000012265.1|latest |
Locus Tag |
PFL_6089
|
Name |
hcp
|
Replicon | chromosome |
Genomic location | 6916187 - 6916675 (+ strand) |
RefSeq | YP_263147.1 |
GI | 70733372 |
Entrez | 3480459 |
INSDC | AAY95277.1 |
NCBI Locus Tag | PFL_6089 |
UniParc | UPI000054E280 |
UniProtKB Acc | Q4K3N6 |
UniProtKB ID | Q4K3N6_PSEF5 |
UniRef100 | UniRef100_Q4K3N6 |
UniRef50 | UniRef50_Q4K3N6 |
UniRef90 | UniRef90_Q4K3N6 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
type VI secretion system effector Hcp
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -1.08 |
Kyte-Doolittle Hydrophobicity Value | -0.440 |
Molecular Weight (kDa) | 17.7 |
Isoelectric Point (pI) | 6.52 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 79 genera
|
Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
Pseudomonas Ortholog Group |
POG000084 (750 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: PFL_6089
Search term: hcp
Search term: type VI secretion system effector Hcp
|