Pseudomonas protegens CHA0, PFLCHA0_c60460

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c60460
Name
Replicon chromosome
Genomic location 6707715 - 6708230 (+ strand)

Cross-References

RefSeq YP_008003278.1
GI 501683452
Entrez 15563963
NCBI Locus Tag PFLCHA0_c60460

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.76
Kyte-Doolittle Hydrophobicity Value -0.202
Molecular Weight (kDa) 18.7
Isoelectric Point (pI) 4.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5N8N STRUCTURAL PROTEIN 02/23/17 Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1 PSEUDOMONAS AERUGINOSA 3.28 ELECTRON MICROSCOPY 94.6
4UQZ PROTEIN TRANSPORT 06/25/14 Coevolution of the ATPase ClpV, the TssB-TssC Sheath and the Accessory HsiE Protein Distinguishes Two Type VI Secretion Classes PSEUDOMONAS AERUGINOSA PAO1 1.599 X-RAY DIFFRACTION 93.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 106 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000082 (1260 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c60460

Human Homologs

References

No references are associated with this feature.