Pseudomonas protegens CHA0, PFLCHA0_c60480 (hcp)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas protegens CHA0
GCF_000397205.1|latest
Locus Tag
PFLCHA0_c60480
Name
hcp
Replicon chromosome
Genomic location 6709859 - 6710347 (+ strand)

Cross-References

RefSeq YP_008003280.1
GI 501683454
Entrez 15563965
NCBI Locus Tag PFLCHA0_c60480

Product

Feature Type CDS
Coding Frame 1
Product Name
protein Hcp
Synonyms
Evidence for Translation
Charge (pH 7) -1.08
Kyte-Doolittle Hydrophobicity Value -0.440
Molecular Weight (kDa) 17.7
Isoelectric Point (pI) 6.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 79 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000084 (770 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c60480
Search term: hcp
Search term: protein Hcp

Human Homologs

References

No references are associated with this feature.