Pseudomonas protegens CHA0, PFLCHA0_c60550 (rhsB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas protegens CHA0 - Assembly GCF_000397205.1
GCF_000397205.1|latest |
| Locus Tag |
PFLCHA0_c60550
|
| Name |
rhsB
|
| Replicon | chromosome |
| Genomic location | 6719085 - 6723545 (+ strand) |
Cross-References
| RefSeq | YP_008003287.1 |
| GI | 501683461 |
| Entrez | 15563972 |
| NCBI Locus Tag | PFLCHA0_c60550 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
protein RhsB
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -15.18 |
| Kyte-Doolittle Hydrophobicity Value | -0.532 |
| Molecular Weight (kDa) | 164938.7 |
| Isoelectric Point (pI) | 6.36 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 7Q97 | TOXIN | 11/12/21 | Structure of the bacterial type VI secretion system effector RhsA. | Pseudomonas protegens Pf-5 | 3.3 | ELECTRON MICROSCOPY | 99.8 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 203 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000092 (1670 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PFLCHA0_c60550
Search term: rhsB
Search term: protein RhsB
|
Human Homologs
References
No references are associated with this feature.