Pseudomonas poae RE_1-1-14, H045_20410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas poae RE*1-1-14
GCF_000336465.1|latest
Locus Tag
H045_20410
Name
Replicon chromosome
Genomic location 4633815 - 4634303 (+ strand)

Cross-References

RefSeq YP_007399640.1
GI 447919072
Entrez 14505872
INSDC AGE28144.1
NCBI Locus Tag H045_20410
UniParc UPI0002A793E4
UniProtKB Acc M4K581
UniProtKB ID M4K581_9PSED
UniRef100 UniRef100_M4K581
UniRef50 UniRef50_Q4K3N6
UniRef90 UniRef90_Q4K3N6

Product

Feature Type CDS
Coding Frame 1
Product Name
type VI secretion system effector Hcp1
Synonyms
Evidence for Translation
Charge (pH 7) -0.08
Kyte-Doolittle Hydrophobicity Value -0.373
Molecular Weight (kDa) 17.5
Isoelectric Point (pI) 6.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 77 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000084 (770 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H045_20410

References

No references are associated with this feature.