Pseudomonas denitrificans ATCC 13867, H681_17835

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas denitrificans ATCC 13867
GCF_000349845.1|latest
Locus Tag
H681_17835
Name
Replicon chromosome
Genomic location 4016643 - 4017113 (+ strand)

Cross-References

RefSeq YP_007658974.1
GI 472326728
Entrez 14997692
NCBI Locus Tag H681_17835

Product

Feature Type CDS
Coding Frame 1
Product Name
Ferritin, Dps family protein
Synonyms
Evidence for Translation
Charge (pH 7) -6.05
Kyte-Doolittle Hydrophobicity Value -0.104
Molecular Weight (kDa) 17544.9
Isoelectric Point (pI) 4.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
8FFD METAL BINDING PROTEIN 12/08/22 Crystal structure of manganeese bound Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form) Pseudomonas aeruginosa PAO1 2.2 X-RAY DIFFRACTION 93.5
8FFB METAL BINDING PROTEIN 12/08/22 Crystal structure of iron bound Dps protein (PA0962) from Pseudomonas aeruginosa (orthorhombic form) Pseudomonas aeruginosa PAO1 2.25 X-RAY DIFFRACTION 93.5
8FFA METAL BINDING PROTEIN 12/08/22 Crystal structure of Apo Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form) Pseudomonas aeruginosa PAO1 2.15 X-RAY DIFFRACTION 93.5
8FFC METAL BINDING PROTEIN 12/08/22 Crystal structure of iron bound Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form) Pseudomonas aeruginosa PAO1 1.85 X-RAY DIFFRACTION 93.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 382 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000927 (509 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: H681_17835

Human Homologs

References

No references are associated with this feature.