Motif View

Internal ID 17655678
Source Database TransTermHP TERM 131
Feature Type terminator
Name
Rho-independent transcription terminator TERM 131
Sequence CGCCGGGCCGCACGGCCCGGCG
Look for more occurrences
Start 620105
End 620126
Strand -
Genomic Context
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments CAGGGAGAGGGAGAA(5' tail) CGCCGGGCC(5' stem) GTGC(loop) GGCCCGGCG(3' stem) GGAAGGAATCAGGCG(3' tail). Confidence: 95.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685