Motif View

Internal ID 17655712
Source Database TransTermHP TERM 175
Feature Type terminator
Name
Rho-independent transcription terminator TERM 175
Sequence TCGCCCCCGTGAAGGCTGACCTTTTTGGGGCCGA
Look for more occurrences
Start 788732
End 788765
Strand +
Genomic Context Located within gene pf4r
Replicon Pseudomonas aeruginosa PAO1 chromosome, complete genome.
Evidence
ECO:0000246
computational combinatorial evidence used in automatic assertion
Additional Comments TTCCATCTCTCGTAA(5' tail) TCGCCCCCGTGAAGG(5' stem) CTGA(loop) CCTTTTTGGGGCCGA(3' stem) TTTTCTTGATTAATA(3' tail). Confidence: 93.

Reference

Rapid, accurate, computational discovery of Rho-independent transcription terminators illuminates their relationship to DNA uptake.
Kingsford CL, Ayanbule K, Salzberg SL
Genome Biol. 2007 ;8(2):R22
PubMed ID: 17313685